PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00573.1.p
Common NameMIMGU_mgv1a024310mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 366aa    MW: 40172.7 Da    PI: 5.6839
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00573.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY924.6e-29185245259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqKe+ gs++prsYYrCt++   +Cp+kk+v+r ++dp ++e+tY+g+H+++
  Migut.F00573.1.p 185 EDGYTWRKYGQKEILGSTYPRSYYRCTHQkfyECPAKKQVQRLDDDPFTFEVTYRGSHTCH 245
                       7****************************9999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.3E-28182246IPR003657WRKY domain
SuperFamilySSF1182907.98E-26183246IPR003657WRKY domain
SMARTSM007747.4E-38184246IPR003657WRKY domain
PROSITE profilePS5081121.333185247IPR003657WRKY domain
PfamPF031061.8E-26185245IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MEENLVALVL YGCKLAKDLE QSLPVLANQP DILSLSCEEI VRVFSNVKDG LNSNQPSNLN  60
SNLRREQQQQ QQLDHEDQIG AEIQEWLRTG GTTTATGVAA VTNTREALDL LNPRATAIVG  120
DGRMKGPMVR ELGDVNGRGR NSKGGARVGD DAPDSSRTRK RRDEGYKTVK RVAAPQMGNL  180
DIPPEDGYTW RKYGQKEILG STYPRSYYRC THQKFYECPA KKQVQRLDDD PFTFEVTYRG  240
SHTCHMSSTA PSAALPLPEQ QPFPPRTTAA AANAYAPLLP YSLPNTNNIH HNWLSMQIFQ  300
DLGGGGVAAA GSSDGAAARF PEYQLPVADM ADAMFNSGSS SSNSMDLIFS SMDDNHKWDS  360
EEKKD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-131862461673WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858137.10.0PREDICTED: WRKY transcription factor 55
TrEMBLA0A022PUP80.0A0A022PUP8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA92801824
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.14e-48WRKY DNA-binding protein 55